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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs73324332 chr8:112857918 G/A KRT14 chr17:39738531-39743173:- 1.14 7.58 5.92E-10 Box Plot
ACC rs73324332 chr8:112857918 G/A KRT6C chr12:52862300-52867569:- 0.82 11.69 3.58E-16 Box Plot
ACC rs73324337 chr8:112864984 A/G KRT14 chr17:39738531-39743173:- 1.13 7.56 6.24E-10 Box Plot
ACC rs73324337 chr8:112864984 A/G KRT6C chr12:52862300-52867569:- 0.82 11.69 3.61E-16 Box Plot
ACC rs73324386 chr8:112899631 G/A KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs73324393 chr8:112900954 C/T KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs73324398 chr8:112901802 C/T KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs73326228 chr8:112916007 C/T KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs73326231 chr8:112921960 A/G KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs73326252 chr8:112942613 A/T KRT6C chr12:52862300-52867569:- 0.76 8.99 3.58E-12 Box Plot
ACC rs73326255 chr8:112945950 C/T KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs73336312 chr8:112738261 T/C KRT6C chr12:52862300-52867569:- 0.76 7.79 2.74E-10 Box Plot
ACC rs73336368 chr8:112750765 G/T KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot
ACC rs735875 chr9:14395234 G/A OR5V1 chr6:29323007-29399744:- 0.64 8.75 8.41E-12 Box Plot
ACC rs73639040 chr9:2786604 G/T PRHOXNB chr13:28552243-28562774:- 0.65 9.11 2.32E-12 Box Plot